Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_18140 | Not Available | Negative | 4509125 - 4509412 | 10792.8 |
| hypothetical protein | DUE52_18145 | Not Available | Negative | 4509409 - 4509702 | 11142.3 |
| sodium transporter | DUE52_18160 | Not Available | Negative | 4512462 - 4514096 | 60087.4 |
| tonb-dependent receptor | DUE52_18165 | Not Available | Negative | 4514222 - 4515685 | 55323.7 |
| gamma-glutamylcyclotransferase | DUE52_18170 | Not Available | Positive | 4515669 - 4516163 | 18695.1 |
| pdz domain-containing protein | DUE52_18175 | Not Available | Negative | 4516286 - 4517731 | 52754.8 |
| hypothetical protein | DUE52_18180 | Not Available | Negative | 4517893 - 4518561 | 24487.1 |
| oxidoreductase | DUE52_18185 | Not Available | Positive | 4518737 - 4519774 | 37222.0 |
| marr family transcriptional regulator | DUE52_18190 | Not Available | Positive | 4519909 - 4520379 | 18151.3 |
| 3-hydroxyacyl-coa dehydrogenase/enoyl-coa hydratase family protein | DUE52_18195 | Not Available | Positive | 4520517 - 4522970 | 90477.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
