Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_01755 | Not Available | Negative | 440831 - 441475 | 23780.3 |
| duf4136 domain-containing protein | DUE52_01760 | Not Available | Negative | 441594 - 442241 | 24072.2 |
| hydrolase tatd | DUE52_01765 | Not Available | Positive | 442441 - 443373 | 34683.2 |
| polyprenyltransferase | DUE52_01770 | Not Available | Positive | 443470 - 444345 | 30647.8 |
| 3-dehydroquinate synthase | DUE52_01775 | Not Available | Positive | 444527 - 445675 | 42626.1 |
| xylose isomerase | DUE52_01780 | Not Available | Positive | 445672 - 446907 | 47410.3 |
| alkaline phosphatase family protein | DUE52_01785 | Not Available | Positive | 447020 - 448414 | 52642.0 |
| sdr family nad(p)-dependent oxidoreductase | DUE52_01790 | Not Available | Positive | 448666 - 449520 | 30898.8 |
| sdr family nad(p)-dependent oxidoreductase | DUE52_01795 | Not Available | Positive | 449540 - 450400 | 31449.3 |
| ribosome-associated translation inhibitor raia | DUE52_01800 | Not Available | Positive | 450664 - 451038 | 14430.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
