Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | DUE52_17890 | Not Available | Positive | 4463874 - 4464350 | 18019.8 |
| tolc family protein | DUE52_17895 | Not Available | Positive | 4464430 - 4465758 | 49938.3 |
| efflux rnd transporter periplasmic adaptor subunit | DUE52_17900 | Not Available | Positive | 4465781 - 4466836 | 38127.9 |
| acrb/acrd/acrf family protein | DUE52_17905 | Not Available | Positive | 4466886 - 4470017 | 112787.0 |
| doxx family membrane protein | DUE52_17910 | Not Available | Negative | 4470176 - 4470634 | 17082.2 |
| arac family transcriptional regulator | DUE52_17915 | Not Available | Positive | 4470726 - 4471568 | 32570.9 |
| duf2807 domain-containing protein | DUE52_17920 | Not Available | Negative | 4471627 - 4472340 | 25781.9 |
| had family hydrolase | DUE52_17925 | Not Available | Positive | 4472695 - 4473330 | 23221.2 |
| pkd domain-containing protein | DUE52_17930 | Not Available | Negative | 4473341 - 4476601 | 117805.0 |
| atp-binding cassette domain-containing protein | DUE52_17935 | Not Available | Negative | 4476961 - 4477575 | 23503.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
