Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DUE52_17840 | Not Available | Positive | 4447921 - 4450362 | 89519.5 |
| sdr family nad(p)-dependent oxidoreductase | DUE52_17845 | Not Available | Negative | 4450384 - 4451070 | 24067.1 |
| pkd domain-containing protein | DUE52_17850 | Not Available | Positive | 4451184 - 4453802 | 98101.5 |
| hypothetical protein | DUE52_17855 | Not Available | Negative | 4453783 - 4456065 | 84793.3 |
| formate dehydrogenase accessory sulfurtransferase fdhd | DUE52_17860 | Not Available | Negative | 4456213 - 4457028 | 29833.8 |
| bifunctional aldolase/short-chain dehydrogenase | DUE52_17865 | Not Available | Positive | 4457284 - 4459419 | 77750.7 |
| sugar isomerase | DUE52_17870 | Not Available | Positive | 4459550 - 4460824 | 47204.9 |
| carbohydrate kinase | DUE52_17875 | Not Available | Positive | 4460939 - 4462336 | 53398.4 |
| crp/fnr family transcriptional regulator | DUE52_17880 | Not Available | Positive | 4462350 - 4462925 | 22157.6 |
| sdr family nad(p)-dependent oxidoreductase | DUE52_17885 | Not Available | Positive | 4463038 - 4463772 | 27036.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
