Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkaline phosphatase family protein | DUE52_17790 | Not Available | Negative | 4433769 - 4435010 | 47117.9 |
| l-rhamnose/proton symporter rhat | DUE52_17795 | Not Available | Negative | 4435017 - 4436054 | 37737.6 |
| sdr family nad(p)-dependent oxidoreductase | DUE52_17800 | Not Available | Positive | 4436528 - 4437238 | 24505.4 |
| insulinase family protein | DUE52_17805 | Not Available | Positive | 4437303 - 4440200 | 107132.0 |
| hypothetical protein | DUE52_17810 | Not Available | Positive | 4440506 - 4441750 | 46349.9 |
| tetr/acrr family transcriptional regulator | DUE52_17815 | Not Available | Positive | 4441890 - 4442501 | 22663.0 |
| sdr family nad(p)-dependent oxidoreductase | DUE52_17820 | Not Available | Positive | 4442574 - 4443320 | 26744.9 |
| duf1905 domain-containing protein | DUE52_17825 | Not Available | Positive | 4443411 - 4443890 | 18175.9 |
| nuclear transport factor 2 family protein | DUE52_17830 | Not Available | Negative | 4443999 - 4444436 | 15875.4 |
| glycoside hydrolase family 95 protein | DUE52_17835 | Not Available | Negative | 4444684 - 4447254 | 95709.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
