Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DUE52_17690 | Not Available | Positive | 4399156 - 4402365 | 116994.0 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_17695 | Not Available | Positive | 4402415 - 4403923 | 55277.6 |
| heme-binding protein | DUE52_17700 | Not Available | Positive | 4404335 - 4407028 | 99250.8 |
| duf1080 domain-containing protein | DUE52_17705 | Not Available | Positive | 4407172 - 4407960 | 28874.7 |
| duf4432 family protein | DUE52_17710 | Not Available | Positive | 4408085 - 4409140 | 38788.9 |
| hypothetical protein | DUE52_17715 | Not Available | Positive | 4409170 - 4410393 | 45356.8 |
| sugar phosphate isomerase/epimerase | DUE52_17720 | Not Available | Positive | 4410416 - 4411447 | 37784.7 |
| gfo/idh/moca family oxidoreductase | DUE52_17725 | Not Available | Positive | 4411563 - 4412726 | 43100.8 |
| sugar abc transporter atp-binding protein | DUE52_17730 | Not Available | Positive | 4412838 - 4414328 | 53830.2 |
| abc transporter permease | DUE52_17735 | Not Available | Positive | 4414352 - 4415335 | 33646.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
