Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine c-acetyltransferase | DUE52_17640 | Not Available | Positive | 4381976 - 4383175 | 43589.3 |
| multidrug resistance efflux transporter family protein | DUE52_17645 | Not Available | Positive | 4383294 - 4384280 | 36021.5 |
| hypothetical protein | DUE52_17650 | Not Available | Positive | 4384361 - 4386730 | 83300.1 |
| cellulase | DUE52_17655 | Not Available | Negative | 4386868 - 4388646 | 65101.2 |
| rna polymerase sigma-70 factor | DUE52_17660 | Not Available | Negative | 4388751 - 4389308 | 21864.4 |
| hypothetical protein | DUE52_17665 | Not Available | Positive | 4389681 - 4389932 | 10343.1 |
| tonb-dependent receptor | DUE52_17670 | Not Available | Positive | 4390224 - 4393277 | 111221.0 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_17675 | Not Available | Positive | 4393289 - 4394782 | 54899.1 |
| duf1549 domain-containing protein | DUE52_17680 | Not Available | Positive | 4394955 - 4397267 | 85680.2 |
| duf1501 domain-containing protein | DUE52_17685 | Not Available | Positive | 4397323 - 4398756 | 53134.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
