Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa desaturase | DUE52_17590 | Not Available | Negative | 4361317 - 4362468 | 42994.6 |
| alcohol dehydrogenase | DUE52_17595 | Not Available | Positive | 4362798 - 4363817 | 37087.7 |
| pepsy domain-containing protein | DUE52_17600 | Not Available | Positive | 4363889 - 4364473 | 22148.3 |
| tonb-dependent receptor | DUE52_17605 | Not Available | Negative | 4364715 - 4367120 | 89391.2 |
| hypothetical protein | DUE52_17610 | Not Available | Negative | 4367291 - 4367809 | 20302.0 |
| glycosyl hydrolase | DUE52_17615 | Not Available | Negative | 4367973 - 4371044 | 112794.0 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_17620 | Not Available | Negative | 4371143 - 4372546 | 51265.0 |
| tonb-dependent receptor | DUE52_17625 | Not Available | Negative | 4372595 - 4375585 | 108407.0 |
| glycosyl hydrolase | DUE52_17630 | Not Available | Positive | 4376760 - 4380020 | 119497.0 |
| nad-dependent epimerase/dehydratase family protein | DUE52_17635 | Not Available | Positive | 4381012 - 4381974 | 36264.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
