Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele/pare family toxin | DUE52_01700 | Not Available | Positive | 432896 - 433195 | 11760.1 |
| sufe family protein | DUE52_01705 | Not Available | Positive | 433192 - 433641 | 16876.1 |
| duf59 domain-containing protein | DUE52_01710 | Not Available | Positive | 433653 - 433964 | 11491.9 |
| brxa/brxb family bacilliredoxin | DUE52_01715 | Not Available | Positive | 434134 - 434559 | 15292.5 |
| membrane dipeptidase | DUE52_01720 | Not Available | Negative | 434664 - 435854 | 43725.7 |
| sdr family nad(p)-dependent oxidoreductase | DUE52_01725 | Not Available | Positive | 436006 - 436758 | 26534.7 |
| paai family thioesterase | DUE52_01730 | Not Available | Negative | 436908 - 437399 | 17412.0 |
| phosphatase | DUE52_01735 | Not Available | Negative | 437465 - 438382 | 34283.4 |
| 30s ribosomal protein s21 | DUE52_01740 | Not Available | Positive | 438593 - 438790 | 7701.57 |
| integrase | DUE52_01745 | Not Available | Positive | 438890 - 439777 | 33703.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
