Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-sulfur cluster assembly accessory protein | DUE52_17540 | Not Available | Positive | 4352357 - 4352683 | 11827.9 |
| energy transducer tonb | DUE52_17545 | Not Available | Negative | 4352752 - 4353165 | 15546.0 |
| acyl-coa thioesterase | DUE52_17550 | Not Available | Positive | 4353207 - 4353764 | 20465.7 |
| nuclear transport factor 2 family protein | DUE52_17555 | Not Available | Negative | 4353826 - 4354257 | 16059.2 |
| methylenetetrahydrofolate reductase | DUE52_17560 | Not Available | Negative | 4354323 - 4355282 | 36263.9 |
| dna-binding response regulator | DUE52_17565 | Not Available | Negative | 4355409 - 4356062 | 24664.2 |
| scyd/scye family protein | DUE52_17570 | Not Available | Positive | 4356673 - 4357773 | 38386.4 |
| hypothetical protein | DUE52_17575 | Not Available | Negative | 4357863 - 4358612 | 27813.0 |
| dimethylaniline monooxygenase | DUE52_17580 | Not Available | Negative | 4358672 - 4359832 | 43149.4 |
| m20 family peptidase | DUE52_17585 | Not Available | Negative | 4359867 - 4361150 | 46789.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
