Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacillithiol system redox-active protein ytxj | DUE52_17490 | Not Available | Negative | 4344133 - 4344471 | 12662.9 |
| phosphoribosylpyrophosphate synthetase | DUE52_17495 | Not Available | Negative | 4344537 - 4344836 | 11196.1 |
| 3-deoxy-d-manno-octulosonic acid transferase | DUE52_17500 | Not Available | Positive | 4344903 - 4346156 | 47321.8 |
| gxxexxy protein | DUE52_17505 | Not Available | Positive | 4346187 - 4346579 | 14979.4 |
| ribosome small subunit-dependent gtpase a | DUE52_17510 | Not Available | Positive | 4346621 - 4347547 | 34748.4 |
| sugar phosphate isomerase/epimerase | DUE52_17515 | Not Available | Negative | 4347616 - 4348533 | 34175.2 |
| cystathionine beta-synthase | DUE52_17520 | Not Available | Negative | 4348562 - 4349938 | 50315.9 |
| duf4276 family protein | DUE52_17525 | Not Available | Negative | 4349935 - 4350558 | 23834.6 |
| chromosome segregation protein smc | DUE52_17530 | Not Available | Negative | 4350555 - 4351661 | 43302.7 |
| methylmalonyl-coa epimerase | DUE52_17535 | Not Available | Negative | 4351767 - 4352186 | 15410.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
