Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DUE52_17440 | Not Available | Positive | 4324909 - 4325901 | 37498.9 |
| mfs transporter | DUE52_17445 | Not Available | Positive | 4326135 - 4327397 | 46817.5 |
| arabinose isomerase | DUE52_17450 | Not Available | Positive | 4327711 - 4329204 | 54966.3 |
| tonb-dependent receptor | DUE52_17455 | Not Available | Positive | 4329242 - 4332442 | 115378.0 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_17460 | Not Available | Positive | 4332463 - 4333902 | 53405.6 |
| hypothetical protein | DUE52_17465 | Not Available | Positive | 4334021 - 4336540 | 94560.6 |
| hypothetical protein | DUE52_17470 | Not Available | Positive | 4336679 - 4339522 | 106248.0 |
| hypothetical protein | DUE52_17475 | Not Available | Positive | 4339617 - 4342442 | 104737.0 |
| sgnh/gdsl hydrolase family protein | DUE52_17480 | Not Available | Positive | 4342439 - 4343158 | 27000.7 |
| gntr family transcriptional regulator | DUE52_17485 | Not Available | Negative | 4343148 - 4343912 | 28761.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
