Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_17390 | Not Available | Negative | 4315255 - 4315659 | 14893.5 |
| glucose-1-phosphate thymidylyltransferase | DUE52_17395 | Not Available | Negative | 4316341 - 4317201 | 31610.3 |
| dtdp-glucose 4,6-dehydratase | DUE52_17400 | Not Available | Negative | 4317304 - 4318362 | 39734.6 |
| udp-glucose 4-epimerase gale | DUE52_17405 | Not Available | Negative | 4318369 - 4319403 | 37918.2 |
| hypothetical protein | DUE52_17410 | Not Available | Positive | 4319683 - 4320555 | 33750.5 |
| 4-phosphopantetheinyl transferase | DUE52_17415 | Not Available | Negative | 4320839 - 4321468 | 23538.3 |
| wd40 repeat domain-containing protein | DUE52_17420 | Not Available | Positive | 4321616 - 4322518 | 33402.9 |
| diviva domain-containing protein | DUE52_17425 | Not Available | Positive | 4322642 - 4323535 | 33265.3 |
| dihydroneopterin aldolase | DUE52_17430 | Not Available | Positive | 4323630 - 4323980 | 13078.6 |
| cupin domain-containing protein | DUE52_17435 | Not Available | Negative | 4324054 - 4324818 | 28760.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
