Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| t9ss c-terminal target domain-containing protein | DUE52_17290 | Not Available | Negative | 4286915 - 4290721 | 138757.0 |
| duf1553 domain-containing protein | DUE52_17295 | Not Available | Positive | 4291163 - 4293964 | 106266.0 |
| dna-binding response regulator | DUE52_17300 | Not Available | Negative | 4294050 - 4294784 | 27902.1 |
| hypothetical protein | DUE52_17305 | Not Available | Negative | 4294798 - 4295322 | 19416.4 |
| hypothetical protein | DUE52_17310 | Not Available | Negative | 4295319 - 4295804 | 18203.2 |
| histidine kinase | DUE52_17315 | Not Available | Negative | 4295867 - 4296940 | 41642.0 |
| intradiol ring-cleavage dioxygenase | DUE52_17320 | Not Available | Positive | 4297167 - 4297799 | 23543.3 |
| acetylhydrolase | DUE52_17325 | Not Available | Negative | 4297800 - 4299602 | 67059.5 |
| carbohydrate-binding domain-containing protein | DUE52_17330 | Not Available | Negative | 4299710 - 4301296 | 53684.8 |
| peptidase m28 family protein | DUE52_17335 | Not Available | Negative | 4301528 - 4302889 | 49193.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
