Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_17240 | Not Available | Positive | 4275935 - 4276189 | 9114.74 |
| sam-dependent dna methyltransferase | DUE52_17245 | Not Available | Positive | 4276379 - 4277833 | 54642.1 |
| restriction endonuclease subunit m | DUE52_17250 | Not Available | Positive | 4277830 - 4279044 | 46143.8 |
| restriction endonuclease subunit r | DUE52_17255 | Not Available | Positive | 4279041 - 4281362 | 87590.7 |
| hypothetical protein | DUE52_17260 | Not Available | Positive | 4281472 - 4282578 | 42597.7 |
| hypothetical protein | DUE52_17265 | Not Available | Positive | 4282523 - 4283230 | 26995.8 |
| transposase | DUE52_17270 | Not Available | Negative | 4283441 - 4283534 | 3668.5 |
| class a beta-lactamase-related serine hydrolase | DUE52_17275 | Not Available | Positive | 4284032 - 4285132 | 40320.6 |
| hypothetical protein | DUE52_17280 | Not Available | Positive | 4285129 - 4286211 | 41118.6 |
| dna-binding response regulator | DUE52_17285 | Not Available | Positive | 4286192 - 4286881 | 26715.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
