Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| esterase | DUE52_17185 | Not Available | Positive | 4260575 - 4261693 | 41360.1 |
| esterase | DUE52_17190 | Not Available | Positive | 4261793 - 4263736 | 72313.0 |
| alpha-n-arabinofuranosidase | DUE52_17195 | Not Available | Positive | 4263793 - 4264845 | 39625.7 |
| 1,4-beta-xylanase | DUE52_17200 | Not Available | Positive | 4264966 - 4266027 | 41074.9 |
| sugar phosphate isomerase/epimerase | DUE52_17205 | Not Available | Positive | 4266276 - 4267172 | 33767.9 |
| pyrroloquinoline quinone-dependent dehydrogenase | DUE52_17210 | Not Available | Positive | 4267206 - 4269329 | 77273.4 |
| hypothetical protein | DUE52_17215 | Not Available | Positive | 4269314 - 4269565 | 9029.64 |
| heparinase | DUE52_17220 | Not Available | Positive | 4269589 - 4271553 | 74015.7 |
| xylan esterase | DUE52_17225 | Not Available | Positive | 4271554 - 4273686 | 77424.3 |
| slc13/dass family transporter | DUE52_17235 | Not Available | Negative | 4274295 - 4275860 | 56995.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
