Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_17135 | Not Available | Positive | 4244599 - 4244826 | 8705.64 |
| sigma-70 family rna polymerase sigma factor | DUE52_17140 | Not Available | Positive | 4245149 - 4245712 | 22281.7 |
| fecr family protein | DUE52_17145 | Not Available | Positive | 4245806 - 4246879 | 40690.6 |
| susc/raga family tonb-linked outer membrane protein | DUE52_17150 | Not Available | Positive | 4247127 - 4250591 | 125175.0 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_17155 | Not Available | Positive | 4250606 - 4252420 | 66443.1 |
| glycoside hydrolase family 43 protein | DUE52_17160 | Not Available | Positive | 4252565 - 4254253 | 63581.7 |
| glycoside hydrolase | DUE52_17165 | Not Available | Positive | 4254351 - 4255934 | 58667.1 |
| alpha-l-fucosidase | DUE52_17170 | Not Available | Positive | 4256115 - 4258199 | 78677.9 |
| esterase | DUE52_17175 | Not Available | Positive | 4258284 - 4259444 | 42697.1 |
| esterase | DUE52_17180 | Not Available | Positive | 4259460 - 4260536 | 39838.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
