Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | DUE52_17085 | Not Available | Positive | 4229688 - 4230428 | 28324.6 |
| type iii polyketide synthase | DUE52_17090 | Not Available | Negative | 4230403 - 4231572 | 42902.9 |
| ubiquinone biosynthesis protein ubia | DUE52_17095 | Not Available | Positive | 4231686 - 4232564 | 33225.2 |
| Trna-gly | Not Available | Not Available | Positive | 4232683 - 4232758 | Not Available |
| sigma-70 family rna polymerase sigma factor | DUE52_17105 | Not Available | Positive | 4233330 - 4233917 | 22730.2 |
| fecr family protein | DUE52_17110 | Not Available | Positive | 4234058 - 4235182 | 42634.1 |
| tonb-dependent receptor | DUE52_17115 | Not Available | Positive | 4235389 - 4238667 | 120562.0 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_17120 | Not Available | Positive | 4238686 - 4240395 | 64092.8 |
| heparan n-sulfatase | DUE52_17125 | Not Available | Positive | 4240457 - 4242025 | 58120.8 |
| catalase/peroxidase hpi | DUE52_17130 | Not Available | Negative | 4242297 - 4244570 | 82596.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
