Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_01650 | Not Available | Positive | 423134 - 423640 | 17676.3 |
| smp-30/gluconolactonase/lre family protein | DUE52_01655 | Not Available | Negative | 423722 - 424633 | 33484.7 |
| sdr family nad(p)-dependent oxidoreductase | DUE52_01660 | Not Available | Negative | 424681 - 425400 | 26169.4 |
| marr family transcriptional regulator | DUE52_01665 | Not Available | Negative | 425576 - 426019 | 16512.2 |
| amidinotransferase | DUE52_01670 | Not Available | Negative | 426382 - 427311 | 34474.2 |
| amidinotransferase | DUE52_01675 | Not Available | Negative | 427329 - 428792 | 56006.4 |
| fe-s cluster assembly atpase sufc | DUE52_01680 | Not Available | Positive | 429147 - 429902 | 27832.8 |
| fe-s cluster assembly protein sufd | DUE52_01685 | Not Available | Positive | 430028 - 431347 | 49666.5 |
| cysteine desulfurase | DUE52_01690 | Not Available | Positive | 431470 - 432708 | 46098.5 |
| hypothetical protein | DUE52_01695 | Not Available | Positive | 432726 - 432917 | 7478.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
