Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | DUE52_16980 | Not Available | Positive | 4202073 - 4202846 | 27477.8 |
| hypothetical protein | DUE52_16985 | Not Available | Positive | 4202892 - 4203410 | 18850.7 |
| helix-turn-helix domain-containing protein | DUE52_16990 | Not Available | Negative | 4203468 - 4204280 | 31130.5 |
| hypothetical protein | DUE52_16995 | Not Available | Negative | 4204277 - 4205209 | 35249.6 |
| n-acetyltransferase | DUE52_17000 | Not Available | Negative | 4205206 - 4205760 | 20420.6 |
| duf1080 domain-containing protein | DUE52_17005 | Not Available | Positive | 4205936 - 4206649 | 26811.7 |
| hydroxypyruvate isomerase | DUE52_17010 | Not Available | Positive | 4206722 - 4207603 | 32721.6 |
| arac family transcriptional regulator | DUE52_17015 | Not Available | Positive | 4207696 - 4208547 | 32587.5 |
| ompa family protein | DUE52_17020 | Not Available | Positive | 4208640 - 4210004 | 50278.7 |
| helicase | DUE52_17025 | Not Available | Positive | 4210126 - 4213422 | 126723.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
