Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate kinase | DUE52_16930 | Not Available | Negative | 4186922 - 4188400 | 54044.1 |
| vcbs repeat-containing protein | DUE52_16935 | Not Available | Positive | 4188541 - 4190118 | 59184.0 |
| hypothetical protein | DUE52_16940 | Not Available | Negative | 4190166 - 4190753 | 21500.0 |
| hypothetical protein | DUE52_16945 | Not Available | Positive | 4190840 - 4191025 | 6861.43 |
| rna polymerase sigma-70 factor | DUE52_16950 | Not Available | Positive | 4191072 - 4191725 | 25403.2 |
| iron dicitrate transport regulator fecr | DUE52_16955 | Not Available | Positive | 4191775 - 4192770 | 37764.2 |
| tonb-dependent receptor | DUE52_16960 | Not Available | Positive | 4192801 - 4196190 | 123988.0 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_16965 | Not Available | Positive | 4196305 - 4197963 | 62381.0 |
| fad-dependent oxidoreductase | DUE52_16970 | Not Available | Positive | 4198089 - 4199849 | 64817.9 |
| fad-dependent oxidoreductase | DUE52_16975 | Not Available | Positive | 4199975 - 4201972 | 73287.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
