Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| argininosuccinate lyase | DUE52_16880 | Not Available | Negative | 4177353 - 4178612 | 46956.9 |
| mfs transporter | DUE52_16885 | Not Available | Negative | 4178750 - 4180006 | 46087.5 |
| duf1080 domain-containing protein | DUE52_16890 | Not Available | Negative | 4180074 - 4180712 | 24540.3 |
| hypothetical protein | DUE52_16895 | Not Available | Negative | 4180832 - 4181410 | 22930.5 |
| dmt family transporter | DUE52_16900 | Not Available | Negative | 4181453 - 4181896 | 15736.9 |
| mannose-6-phosphate isomerase | DUE52_16905 | Not Available | Negative | 4182134 - 4183111 | 36467.1 |
| m20/m25/m40 family metallo-hydrolase | DUE52_16910 | Not Available | Negative | 4183115 - 4184236 | 41501.6 |
| serine protease | DUE52_16915 | Not Available | Negative | 4184226 - 4185110 | 34000.5 |
| dna-binding response regulator | DUE52_16920 | Not Available | Negative | 4185157 - 4185867 | 27074.8 |
| sigma-70 family rna polymerase sigma factor | DUE52_16925 | Not Available | Positive | 4186346 - 4186900 | 21553.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
