Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylsulfatase | DUE52_16830 | Not Available | Positive | 4165873 - 4167591 | 64085.2 |
| restriction endonuclease subunit r | DUE52_16835 | Not Available | Negative | 4167592 - 4168035 | 17301.0 |
| amp nucleosidase | DUE52_16840 | Not Available | Positive | 4168098 - 4168868 | 28645.7 |
| tetratricopeptide repeat protein | DUE52_16845 | Not Available | Negative | 4168969 - 4170309 | 49651.3 |
| hsp20/alpha crystallin family protein | DUE52_16850 | Not Available | Positive | 4170708 - 4171145 | 16469.5 |
| phosphoribosylanthranilate isomerase | DUE52_16855 | Not Available | Negative | 4171203 - 4171850 | 23082.0 |
| mfs transporter | DUE52_16860 | Not Available | Positive | 4171998 - 4173242 | 45020.0 |
| atp-binding protein | DUE52_16865 | Not Available | Positive | 4173340 - 4174200 | 31632.3 |
| transcriptional regulator | DUE52_16870 | Not Available | Positive | 4174407 - 4176515 | 79920.7 |
| uma2 family endonuclease | DUE52_16875 | Not Available | Negative | 4176684 - 4177295 | 23239.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
