Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DUE52_16680 | Not Available | Negative | 4129959 - 4130687 | 25728.0 |
| sdr family nad(p)-dependent oxidoreductase | DUE52_16685 | Not Available | Positive | 4130835 - 4131575 | 26801.3 |
| rok family protein | DUE52_16690 | Not Available | Positive | 4131748 - 4132662 | 32929.2 |
| udp-n-acetylmuramate dehydrogenase | DUE52_16695 | Not Available | Negative | 4132775 - 4133800 | 37755.4 |
| spor domain-containing protein | DUE52_16700 | Not Available | Positive | 4133945 - 4134538 | 22488.8 |
| gdp-mannose 4,6-dehydratase | DUE52_16705 | Not Available | Positive | 4134581 - 4135693 | 42157.5 |
| do family serine endopeptidase | DUE52_16710 | Not Available | Negative | 4135851 - 4137383 | 54446.0 |
| ribonuclease iii | DUE52_16715 | Not Available | Negative | 4137813 - 4138559 | 28423.1 |
| beta-ketoacyl-[acyl-carrier-protein] synthase ii | DUE52_16720 | Not Available | Negative | 4138604 - 4139857 | 44697.1 |
| acyl carrier protein | DUE52_16725 | Not Available | Negative | 4139882 - 4140118 | 8562.97 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
