Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase purh | DUE52_16630 | Not Available | Positive | 4117240 - 4118754 | 55059.4 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | DUE52_16635 | Not Available | Positive | 4118758 - 4119492 | 28792.6 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc | DUE52_16640 | Not Available | Positive | 4119504 - 4119791 | 10914.9 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | DUE52_16645 | Not Available | Negative | 4119827 - 4120318 | 18607.5 |
| aaa family atpase | DUE52_16650 | Not Available | Negative | 4120322 - 4121440 | 42960.8 |
| tryptophan-rich sensory protein | DUE52_16655 | Not Available | Negative | 4121490 - 4122263 | 28165.7 |
| flagellar motor protein motb | DUE52_16660 | Not Available | Negative | 4122343 - 4124259 | 70682.5 |
| polysaccharide biosynthesis protein | DUE52_16665 | Not Available | Positive | 4124873 - 4126426 | 58125.3 |
| histidine kinase | DUE52_16670 | Not Available | Negative | 4126851 - 4129043 | 84679.2 |
| atp-binding cassette domain-containing protein | DUE52_16675 | Not Available | Negative | 4129103 - 4129849 | 27625.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
