Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homoserine o-acetyltransferase | DUE52_01595 | Not Available | Negative | 405293 - 406339 | 39081.4 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | DUE52_01600 | Not Available | Negative | 406476 - 407780 | 47455.2 |
| gfo/idh/moca family oxidoreductase | DUE52_01605 | Not Available | Negative | 408407 - 409885 | 54531.9 |
| duf721 domain-containing protein | DUE52_01610 | Not Available | Positive | 410212 - 410538 | 12619.5 |
| ld-carboxypeptidase | DUE52_01615 | Not Available | Positive | 410545 - 411450 | 33607.7 |
| amidohydrolase | DUE52_01625 | Not Available | Negative | 411993 - 413336 | 48105.3 |
| tonb-dependent receptor | DUE52_01630 | Not Available | Positive | 413485 - 416613 | 112683.0 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_01635 | Not Available | Positive | 416669 - 418159 | 53572.9 |
| susc/raga family tonb-linked outer membrane protein | DUE52_01640 | Not Available | Positive | 418478 - 421600 | 112185.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DUE52_01645 | Not Available | Positive | 421625 - 423106 | 53798.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
