Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase | DUE52_16530 | Not Available | Positive | 4093814 - 4094419 | 21012.7 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DUE52_16535 | Not Available | Positive | 4094416 - 4095573 | 41940.2 |
| dna-binding response regulator | DUE52_16540 | Not Available | Positive | 4095586 - 4096215 | 23880.2 |
| duf255 domain-containing protein | DUE52_16545 | Not Available | Negative | 4096302 - 4096832 | 18691.3 |
| yiha family ribosome biogenesis gtp-binding protein | DUE52_16550 | Not Available | Positive | 4097056 - 4097679 | 23980.9 |
| hypothetical protein | DUE52_16555 | Not Available | Positive | 4097758 - 4098255 | 18378.7 |
| tigr03364 family fad-dependent oxidoreductase | DUE52_16560 | Not Available | Negative | 4098403 - 4099548 | 42690.8 |
| had family hydrolase | DUE52_16565 | Not Available | Negative | 4099568 - 4100323 | 27583.0 |
| ethanolamine ammonia-lyase subunit eutb | DUE52_16570 | Not Available | Positive | 4100507 - 4101886 | 50418.7 |
| ethanolamine ammonia-lyase subunit eutc | DUE52_16575 | Not Available | Positive | 4101883 - 4102701 | 30014.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
