Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar transporter | DUE52_16480 | Not Available | Positive | 4082008 - 4084314 | 85480.6 |
| lipopolysaccharide biosynthesis protein | DUE52_16485 | Not Available | Positive | 4084314 - 4085393 | 41450.6 |
| nucleotide sugar dehydrogenase | DUE52_16490 | Not Available | Positive | 4085407 - 4086666 | 46783.2 |
| hypothetical protein | DUE52_16495 | Not Available | Positive | 4086678 - 4088033 | 51541.6 |
| glycosyltransferase family 2 protein | DUE52_16500 | Not Available | Positive | 4088030 - 4088941 | 34906.5 |
| oligosaccharide repeat unit polymerase | DUE52_16505 | Not Available | Positive | 4088938 - 4090137 | 45802.5 |
| alpha-1,2-fucosyltransferase | DUE52_16510 | Not Available | Positive | 4090162 - 4091058 | 34765.6 |
| glycosyltransferase family 2 protein | DUE52_16515 | Not Available | Positive | 4091077 - 4091952 | 33826.3 |
| glycosyltransferase family 1 protein | DUE52_16520 | Not Available | Positive | 4091949 - 4093142 | 44759.4 |
| sugar transferase | DUE52_16525 | Not Available | Positive | 4093207 - 4093812 | 22636.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
