Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretory system conjugative dna transfer family protein | DUE52_16430 | Not Available | Negative | 4072319 - 4074124 | 67201.9 |
| plasmid mobilization relaxosome protein mobc | DUE52_16435 | Not Available | Positive | 4074388 - 4074762 | 13749.6 |
| relaxase | DUE52_16440 | Not Available | Positive | 4074752 - 4076188 | 55165.8 |
| Trna-asn | Not Available | Not Available | Positive | 4076346 - 4076422 | Not Available |
| hypothetical protein | DUE52_16450 | Not Available | Negative | 4076502 - 4076801 | 11024.3 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | DUE52_16455 | Not Available | Negative | 4076838 - 4077458 | 23423.4 |
| glycosyltransferase | DUE52_16460 | Not Available | Negative | 4077555 - 4078769 | 45760.1 |
| trna guanosine(34) transglycosylase tgt | DUE52_16465 | Not Available | Positive | 4078902 - 4080032 | 42306.7 |
| ompa family protein | DUE52_16470 | Not Available | Positive | 4080296 - 4081726 | 53437.4 |
| hypothetical protein | DUE52_16475 | Not Available | Negative | 4081735 - 4081947 | 8182.33 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
