Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_16380 | Not Available | Positive | 4059302 - 4059511 | 7618.17 |
| gamma-glutamylcyclotransferase | DUE52_16385 | Not Available | Positive | 4059724 - 4060551 | 30122.8 |
| hypothetical protein | DUE52_16390 | Not Available | Positive | 4060551 - 4061648 | 39438.8 |
| hypothetical protein | DUE52_16395 | Not Available | Negative | 4061732 - 4062130 | 15207.1 |
| conjugal transfer protein | DUE52_16400 | Not Available | Negative | 4062108 - 4064864 | 102754.0 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | DUE52_16405 | Not Available | Positive | 4065227 - 4066672 | 53163.2 |
| hypothetical protein | DUE52_16410 | Not Available | Positive | 4066674 - 4067423 | 28730.8 |
| alanine racemase | DUE52_16415 | Not Available | Negative | 4067437 - 4068537 | 41128.0 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | DUE52_16420 | Not Available | Negative | 4068524 - 4069858 | 50128.2 |
| hypothetical protein | DUE52_16425 | Not Available | Negative | 4069864 - 4072293 | 92968.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
