Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DUE52_16330 | Not Available | Negative | 4048846 - 4050096 | 45660.5 |
| hypothetical protein | DUE52_16335 | Not Available | Positive | 4050322 - 4051419 | 42341.0 |
| hypothetical protein | DUE52_16340 | Not Available | Positive | 4051769 - 4052005 | 8957.51 |
| hypothetical protein | DUE52_16345 | Not Available | Positive | 4052002 - 4053399 | 53139.8 |
| recombinase family protein | DUE52_16350 | Not Available | Negative | 4053392 - 4055017 | 62543.4 |
| hypothetical protein | DUE52_16355 | Not Available | Negative | 4055541 - 4055909 | 14086.8 |
| dna-binding protein | DUE52_16360 | Not Available | Positive | 4056250 - 4056438 | 7336.88 |
| hypothetical protein | DUE52_16365 | Not Available | Positive | 4056518 - 4057432 | 34660.5 |
| dna repair protein | DUE52_16370 | Not Available | Positive | 4057446 - 4057919 | 17448.2 |
| duf1738 domain-containing protein | DUE52_16375 | Not Available | Positive | 4058147 - 4059088 | 35667.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
