Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_16175 | Not Available | Negative | 4010974 - 4012140 | 42751.6 |
| sdr family nad(p)-dependent oxidoreductase | DUE52_16180 | Not Available | Positive | 4012338 - 4013423 | 38921.5 |
| hypothetical protein | DUE52_16185 | Not Available | Negative | 4013549 - 4014181 | 22748.1 |
| serine/threonine protein kinase | DUE52_16190 | Not Available | Negative | 4014230 - 4015990 | 64722.7 |
| stp1/irep family pp2c-type ser/thr phosphatase | DUE52_16195 | Not Available | Negative | 4015983 - 4016936 | 35494.3 |
| fha domain-containing protein | DUE52_16200 | Not Available | Negative | 4016978 - 4018672 | 61681.7 |
| hypothetical protein | DUE52_16205 | Not Available | Positive | 4018895 - 4020964 | 78587.8 |
| dna-binding response regulator | DUE52_16210 | Not Available | Negative | 4020978 - 4021628 | 23927.5 |
| fad-dependent oxidoreductase | DUE52_16215 | Not Available | Negative | 4021993 - 4023624 | 60774.1 |
| esterase | DUE52_16220 | Not Available | Negative | 4023725 - 4024447 | 26477.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
