Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box protein | DUE52_16125 | Not Available | Negative | 3996879 - 3999446 | 95536.8 |
| hypothetical protein | DUE52_16130 | Not Available | Positive | 3999724 - 4000359 | 24199.7 |
| gh3 auxin-responsive promoter | DUE52_16135 | Not Available | Negative | 4000354 - 4001874 | 57847.6 |
| hypothetical protein | DUE52_16140 | Not Available | Negative | 4001945 - 4003216 | 45625.3 |
| hypothetical protein | DUE52_16145 | Not Available | Negative | 4003343 - 4004131 | 30273.3 |
| hypothetical protein | DUE52_16150 | Not Available | Negative | 4004200 - 4004526 | 12674.9 |
| hypothetical protein | DUE52_16155 | Not Available | Negative | 4004596 - 4004838 | 8926.39 |
| potassium transporter kup | DUE52_16160 | Not Available | Positive | 4005138 - 4007081 | 72917.4 |
| pas domain s-box protein | DUE52_16165 | Not Available | Negative | 4007130 - 4009967 | 107270.0 |
| t9ss c-terminal target domain-containing protein | DUE52_16170 | Not Available | Negative | 4010395 - 4010787 | 14330.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
