Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DUE52_16075 | Not Available | Positive | 3983394 - 3984230 | 32585.3 |
| hypothetical protein | DUE52_16080 | Not Available | Positive | 3984365 - 3984568 | 7926.58 |
| Tmrna,resume consensus sequence (at 162): aataactggcgaatataa | Not Available | Not Available | Positive | 3984724 - 3985168 | Not Available |
| hypothetical protein | DUE52_16090 | Not Available | Negative | 3985132 - 3985761 | 23589.2 |
| pkd domain-containing protein | DUE52_16095 | Not Available | Positive | 3985917 - 3989327 | 126174.0 |
| blai/meci/copy family transcriptional regulator | DUE52_16100 | Not Available | Positive | 3989507 - 3989911 | 15516.5 |
| hypothetical protein | DUE52_16105 | Not Available | Positive | 3989933 - 3991873 | 73359.4 |
| helicase snf2 | DUE52_16110 | Not Available | Positive | 3992004 - 3995579 | 135233.0 |
| hypothetical protein | DUE52_16115 | Not Available | Negative | 3995724 - 3995984 | 10081.6 |
| hypothetical protein | DUE52_16120 | Not Available | Positive | 3996030 - 3996827 | 29925.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
