Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2188 domain-containing protein | DUE52_01545 | Not Available | Negative | 393977 - 394174 | 7371.94 |
| tolc family protein | DUE52_01550 | Not Available | Negative | 394268 - 395641 | 51713.3 |
| amidohydrolase | DUE52_01555 | Not Available | Positive | 395784 - 397415 | 60322.5 |
| ion transporter | DUE52_01560 | Not Available | Positive | 397452 - 398282 | 31469.2 |
| m48 family peptidase | DUE52_01565 | Not Available | Negative | 398292 - 399074 | 28315.6 |
| dna-directed rna polymerase subunit delta | DUE52_01570 | Not Available | Negative | 399347 - 400243 | 33048.9 |
| acetylxylan esterase | DUE52_01575 | Not Available | Negative | 400355 - 401653 | 47748.5 |
| (4fe-4s)-binding protein | DUE52_01580 | Not Available | Positive | 401761 - 401994 | 8711.37 |
| beta-n-acetylglucosaminidase | DUE52_01585 | Not Available | Negative | 402180 - 403844 | 62810.0 |
| rok family transcriptional regulator | DUE52_01590 | Not Available | Negative | 403861 - 405072 | 44108.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
