Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | DUE52_15975 | Not Available | Negative | 3962459 - 3963616 | 40998.4 |
| duf1801 domain-containing protein | DUE52_15980 | Not Available | Positive | 3963744 - 3964130 | 14899.1 |
| pd-(d/e)xk nuclease family protein | DUE52_15985 | Not Available | Negative | 3964482 - 3967442 | 113466.0 |
| pp_03179 | DUE52_15990 | Not Available | Negative | 3967537 - 3968124 | Not Available |
| duf1835 domain-containing protein | DUE52_15995 | Not Available | Negative | 3968124 - 3969071 | 35788.6 |
| hypothetical protein | DUE52_16000 | Not Available | Negative | 3969081 - 3971102 | 77266.2 |
| tetraacyldisaccharide 4'-kinase | DUE52_16005 | Not Available | Negative | 3971201 - 3972247 | 39404.6 |
| o-succinylbenzoate synthase | DUE52_16010 | Not Available | Positive | 3972339 - 3973448 | 42014.5 |
| oxygen-dependent coproporphyrinogen oxidase | DUE52_16015 | Not Available | Negative | 3973472 - 3974371 | 34095.1 |
| atp-binding protein | DUE52_16020 | Not Available | Negative | 3974498 - 3975124 | 23318.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
