Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | DUE52_15915 | Not Available | Negative | 3945805 - 3946491 | 26190.8 |
| sugar phosphate isomerase/epimerase | DUE52_15920 | Not Available | Positive | 3946756 - 3947793 | 37987.6 |
| sugar phosphate isomerase/epimerase | DUE52_15925 | Not Available | Negative | 3948311 - 3949267 | 34826.2 |
| rpn family recombination-promoting nuclease/putative transposase | DUE52_15930 | Not Available | Negative | 3949400 - 3950230 | 31275.8 |
| alpha/beta fold hydrolase | DUE52_15935 | Not Available | Positive | 3950879 - 3951868 | 37005.8 |
| sorbosone dehydrogenase family protein | DUE52_15940 | Not Available | Positive | 3951964 - 3953292 | 47887.4 |
| sdr family nad(p)-dependent oxidoreductase | DUE52_15945 | Not Available | Positive | 3953464 - 3954213 | 26963.3 |
| padr family transcriptional regulator | DUE52_15950 | Not Available | Positive | 3954594 - 3954938 | 12719.4 |
| hypothetical protein | DUE52_15955 | Not Available | Positive | 3955255 - 3957651 | 89176.7 |
| acrb/acrd/acrf family protein | DUE52_15970 | Not Available | Negative | 3959288 - 3962446 | 116310.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
