Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | DUE52_15865 | Not Available | Positive | 3930276 - 3931079 | 29980.5 |
| threonine/serine dehydratase | DUE52_15870 | Not Available | Positive | 3931236 - 3932198 | 34636.8 |
| gnat family n-acetyltransferase | DUE52_15875 | Not Available | Positive | 3932402 - 3933214 | 30491.8 |
| hypothetical protein | DUE52_15880 | Not Available | Positive | 3933406 - 3934680 | 47366.9 |
| helix-turn-helix transcriptional regulator | DUE52_15885 | Not Available | Positive | 3934758 - 3937607 | 106103.0 |
| response regulator | DUE52_15890 | Not Available | Negative | 3937611 - 3938000 | 14738.8 |
| acrb/acrd/acrf family protein | DUE52_15895 | Not Available | Negative | 3938704 - 3941862 | 116875.0 |
| efflux rnd transporter periplasmic adaptor subunit | DUE52_15900 | Not Available | Negative | 3941982 - 3943064 | 39957.5 |
| tolc family protein | DUE52_15905 | Not Available | Negative | 3943071 - 3944324 | 48082.4 |
| sensor histidine kinase | DUE52_15910 | Not Available | Negative | 3944433 - 3945800 | 51449.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
