Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | DUE52_15815 | Not Available | Negative | 3918887 - 3922267 | 124010.0 |
| fecr family protein | DUE52_15820 | Not Available | Negative | 3922399 - 3923481 | 40959.0 |
| sigma-70 family rna polymerase sigma factor | DUE52_15825 | Not Available | Negative | 3923573 - 3924181 | 23726.8 |
| intradiol ring-cleavage dioxygenase | DUE52_15830 | Not Available | Positive | 3924421 - 3925149 | 25765.9 |
| pirin | DUE52_15835 | Not Available | Positive | 3925115 - 3925873 | 28223.4 |
| thioredoxin | DUE52_15840 | Not Available | Negative | 3926027 - 3926374 | 12862.7 |
| sigma-70 family rna polymerase sigma factor | DUE52_15845 | Not Available | Negative | 3926442 - 3926993 | 21359.4 |
| serine acetyltransferase | DUE52_15850 | Not Available | Negative | 3927272 - 3928096 | 30377.2 |
| glucose sorbosone dehydrogenase | DUE52_15855 | Not Available | Positive | 3928391 - 3929605 | 43806.4 |
| methylated-dna--[protein]-cysteine s-methyltransferase | DUE52_15860 | Not Available | Positive | 3929718 - 3930194 | 17553.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
