Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_15715 | Not Available | Negative | 3895274 - 3895474 | 7106.02 |
| sugar phosphate isomerase/epimerase | DUE52_15720 | Not Available | Negative | 3895719 - 3896771 | 39117.9 |
| four helix bundle protein | DUE52_15725 | Not Available | Negative | 3896828 - 3897202 | 14182.1 |
| gfo/idh/moca family oxidoreductase | DUE52_15730 | Not Available | Negative | 3897237 - 3898382 | 42747.1 |
| gfo/idh/moca family oxidoreductase | DUE52_15735 | Not Available | Negative | 3898537 - 3899673 | 41905.1 |
| mfs transporter | DUE52_15740 | Not Available | Positive | 3899963 - 3901174 | 43370.2 |
| hypothetical protein | DUE52_15745 | Not Available | Positive | 3901385 - 3901630 | 9561.93 |
| nadp-dependent malic enzyme | DUE52_15750 | Not Available | Positive | 3901781 - 3904048 | 82895.4 |
| duf4385 domain-containing protein | DUE52_15755 | Not Available | Negative | 3904146 - 3904646 | 19656.5 |
| sigma-70 family rna polymerase sigma factor | DUE52_15760 | Not Available | Positive | 3904850 - 3905338 | 18662.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
