Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DUE52_15660 | Not Available | Negative | 3881160 - 3884165 | 109448.0 |
| dna-binding response regulator | DUE52_15665 | Not Available | Negative | 3884676 - 3885452 | 29963.8 |
| sensor histidine kinase | DUE52_15670 | Not Available | Negative | 3885424 - 3886620 | 45540.4 |
| tonb-dependent receptor | DUE52_15675 | Not Available | Negative | 3886642 - 3889104 | 92656.5 |
| patatin | DUE52_15680 | Not Available | Negative | 3889177 - 3889989 | 29950.5 |
| mbl fold metallo-hydrolase | DUE52_15685 | Not Available | Negative | 3890253 - 3891092 | 31285.1 |
| atp-binding cassette domain-containing protein | DUE52_15690 | Not Available | Negative | 3891685 - 3892560 | 32027.1 |
| molybdate abc transporter permease subunit | DUE52_15695 | Not Available | Negative | 3892545 - 3893216 | 24856.1 |
| molybdate abc transporter substrate-binding protein | DUE52_15700 | Not Available | Negative | 3893213 - 3893950 | 26527.5 |
| hypothetical protein | DUE52_15705 | Not Available | Positive | 3894037 - 3894588 | 20099.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
