Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate isomerase/epimerase | DUE52_15610 | Not Available | Positive | 3865244 - 3866080 | 31435.7 |
| hypothetical protein | DUE52_15615 | Not Available | Positive | 3866972 - 3869455 | 89634.6 |
| hypothetical protein | DUE52_15620 | Not Available | Positive | 3869461 - 3869961 | 18807.3 |
| hypothetical protein | DUE52_15625 | Not Available | Positive | 3870127 - 3870873 | 28623.2 |
| pkd domain-containing protein | DUE52_15630 | Not Available | Negative | 3870929 - 3873340 | 87075.9 |
| hypothetical protein | DUE52_15635 | Not Available | Negative | 3873411 - 3873917 | 19051.7 |
| hypothetical protein | DUE52_15640 | Not Available | Negative | 3873926 - 3874795 | 31554.2 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_15645 | Not Available | Negative | 3874980 - 3876359 | 50706.0 |
| tonb-dependent receptor | DUE52_15650 | Not Available | Negative | 3876356 - 3879400 | 111496.0 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_15655 | Not Available | Negative | 3879750 - 3881147 | 50632.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
