Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_15560 | Not Available | Positive | 3852207 - 3853913 | 67073.3 |
| hypothetical protein | DUE52_15565 | Not Available | Positive | 3854087 - 3854746 | 25169.7 |
| hypothetical protein | DUE52_15570 | Not Available | Negative | 3855246 - 3855425 | 6738.04 |
| abc transporter permease | DUE52_15575 | Not Available | Positive | 3855572 - 3856810 | 46172.2 |
| t9ss c-terminal target domain-containing protein | DUE52_15580 | Not Available | Negative | 3856904 - 3861028 | 149020.0 |
| hypothetical protein | DUE52_15585 | Not Available | Negative | 3861684 - 3862673 | 36340.7 |
| pspc domain-containing protein | DUE52_15590 | Not Available | Negative | 3862680 - 3863195 | 19193.1 |
| n-(5'-phosphoribosyl)anthranilate isomerase | DUE52_15595 | Not Available | Negative | 3863340 - 3863966 | 22836.2 |
| endonuclease iii | DUE52_15600 | Not Available | Negative | 3864047 - 3864700 | 24310.7 |
| hypothetical protein | DUE52_15605 | Not Available | Positive | 3864831 - 3865160 | 12850.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
