Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor | DUE52_01490 | Not Available | Negative | 382670 - 383353 | 26694.9 |
| hypothetical protein | DUE52_01500 | Not Available | Positive | 384072 - 385625 | 56835.0 |
| dna-binding response regulator | DUE52_01505 | Not Available | Positive | 385707 - 386390 | 25713.9 |
| sensor histidine kinase | DUE52_01510 | Not Available | Positive | 386394 - 387764 | 52074.9 |
| hypothetical protein | DUE52_01515 | Not Available | Positive | 388008 - 388277 | 10255.1 |
| sulp family inorganic anion transporter | DUE52_01520 | Not Available | Positive | 388339 - 389967 | 58265.1 |
| port family protein | DUE52_01525 | Not Available | Negative | 390061 - 390714 | 24098.3 |
| dna topoisomerase ib | DUE52_01530 | Not Available | Positive | 390844 - 391905 | 40830.0 |
| sodium:proton antiporter | DUE52_01535 | Not Available | Positive | 391965 - 393209 | 45743.5 |
| duf421 domain-containing protein | DUE52_01540 | Not Available | Negative | 393261 - 393956 | 25995.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
