Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_15410 | Not Available | Positive | 3802398 - 3802700 | 11313.5 |
| hybrid sensor histidine kinase/response regulator | DUE52_15415 | Not Available | Positive | 3802781 - 3806809 | 152318.0 |
| duf11 domain-containing protein | DUE52_15420 | Not Available | Positive | 3807001 - 3814539 | 253478.0 |
| hypothetical protein | DUE52_15425 | Not Available | Positive | 3814718 - 3815029 | 11013.6 |
| lyttr family transcriptional regulator | DUE52_15430 | Not Available | Positive | 3815241 - 3815585 | 13563.9 |
| response regulator | DUE52_15435 | Not Available | Negative | 3815609 - 3818332 | 101980.0 |
| cold shock domain-containing protein | DUE52_15440 | Not Available | Positive | 3818692 - 3819147 | 17010.1 |
| tannase/feruloyl esterase family alpha/beta hydrolase | DUE52_15445 | Not Available | Negative | 3819545 - 3821173 | 58422.3 |
| class ii fructose-bisphosphate aldolase | DUE52_15450 | Not Available | Positive | 3821416 - 3822495 | 39307.4 |
| m24 family metallopeptidase | DUE52_15455 | Not Available | Negative | 3823818 - 3825179 | 51779.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
