Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain-containing sensor histidine kinase | DUE52_15360 | Not Available | Negative | 3787401 - 3789395 | 74577.2 |
| hypothetical protein | DUE52_15365 | Not Available | Positive | 3789612 - 3790754 | 41731.0 |
| hypothetical protein | DUE52_15370 | Not Available | Positive | 3790883 - 3791242 | 14429.5 |
| glycoside hydrolase family 32 protein | DUE52_15375 | Not Available | Negative | 3791263 - 3792792 | 56804.2 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_15380 | Not Available | Negative | 3792916 - 3794634 | 63738.1 |
| tonb-dependent receptor | DUE52_15385 | Not Available | Negative | 3794651 - 3797809 | 114091.0 |
| carbohydrate kinase | DUE52_15390 | Not Available | Negative | 3797859 - 3798752 | 32580.0 |
| mfs transporter | DUE52_15395 | Not Available | Negative | 3798798 - 3800123 | 48189.0 |
| gfo/idh/moca family oxidoreductase | DUE52_15400 | Not Available | Positive | 3800619 - 3801962 | 50118.3 |
| gnat family n-acetyltransferase | DUE52_15405 | Not Available | Negative | 3802094 - 3802375 | 10416.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
