Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid adenylation domain-containing protein | DUE52_15310 | Not Available | Positive | 3766860 - 3773501 | 241806.0 |
| amino acid adenylation domain-containing protein | DUE52_15315 | Not Available | Positive | 3773525 - 3778771 | 195954.0 |
| aspartate 1-decarboxylase | DUE52_15320 | Not Available | Positive | 3778871 - 3779224 | 12845.7 |
| hypothetical protein | DUE52_15325 | Not Available | Negative | 3779358 - 3779858 | 18140.5 |
| duf4468 domain-containing protein | DUE52_15330 | Not Available | Negative | 3779862 - 3780416 | 20406.7 |
| esterase | DUE52_15335 | Not Available | Positive | 3780694 - 3781848 | 42727.6 |
| esterase family protein | DUE52_15340 | Not Available | Positive | 3781888 - 3782766 | 32817.4 |
| response regulator | DUE52_15345 | Not Available | Positive | 3782953 - 3783354 | 15263.4 |
| duf2254 domain-containing protein | DUE52_15350 | Not Available | Negative | 3783540 - 3784874 | 49823.2 |
| hypothetical protein | DUE52_15355 | Not Available | Negative | 3785120 - 3786841 | 65784.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
