Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_15260 | Not Available | Positive | 3755050 - 3756594 | 57403.3 |
| glycosyltransferase family 1 protein | DUE52_15265 | Not Available | Positive | 3756674 - 3757765 | 41378.0 |
| hypothetical protein | DUE52_15270 | Not Available | Positive | 3757762 - 3759408 | 62034.2 |
| glycosyltransferase family 1 protein | DUE52_15275 | Not Available | Positive | 3759415 - 3760464 | 40002.0 |
| glycosyltransferase family 1 protein | DUE52_15280 | Not Available | Positive | 3760466 - 3761662 | 44978.8 |
| glycosyltransferase | DUE52_15285 | Not Available | Positive | 3761677 - 3762837 | 43265.6 |
| glycosyltransferase | DUE52_15290 | Not Available | Positive | 3762845 - 3763999 | 42588.6 |
| putative colanic acid biosynthesis acetyltransferase | DUE52_15295 | Not Available | Positive | 3763965 - 3764537 | 21041.6 |
| glycosyltransferase family 2 protein | DUE52_15300 | Not Available | Positive | 3764566 - 3765387 | 31940.3 |
| colanic acid biosynthesis glycosyltransferase wcai | DUE52_15305 | Not Available | Positive | 3765421 - 3766761 | 50272.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
