Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lyttr family transcriptional regulator | DUE52_15210 | Not Available | Negative | 3740580 - 3740921 | 12868.9 |
| hypothetical protein | DUE52_15215 | Not Available | Negative | 3740918 - 3741457 | 20642.5 |
| t9ss c-terminal target domain-containing protein | DUE52_15220 | Not Available | Positive | 3741801 - 3744389 | 93720.5 |
| hypothetical protein | DUE52_15225 | Not Available | Positive | 3744399 - 3745067 | 25268.1 |
| hypothetical protein | DUE52_15230 | Not Available | Positive | 3745921 - 3748602 | 96653.4 |
| polysaccharide export protein | DUE52_15235 | Not Available | Positive | 3749474 - 3750262 | 28898.1 |
| capsular biosynthesis protein | DUE52_15240 | Not Available | Positive | 3750267 - 3752609 | 87779.2 |
| sugar transferase | DUE52_15245 | Not Available | Positive | 3752735 - 3753403 | 26229.3 |
| upxy family transcription antiterminator | DUE52_15250 | Not Available | Positive | 3753426 - 3753908 | 18760.8 |
| hypothetical protein | DUE52_15255 | Not Available | Positive | 3754089 - 3754994 | 34161.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
