Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatase pap2 family protein | DUE52_15160 | Not Available | Positive | 3726888 - 3728288 | 51574.8 |
| amidophosphoribosyltransferase | DUE52_15165 | Not Available | Negative | 3728397 - 3730289 | 72191.4 |
| glycoside hydrolase | DUE52_15170 | Not Available | Negative | 3730560 - 3731672 | 42590.3 |
| hypothetical protein | DUE52_15175 | Not Available | Negative | 3731725 - 3732225 | 19493.9 |
| hypothetical protein | DUE52_15180 | Not Available | Negative | 3732215 - 3732415 | 7434.57 |
| nadh-quinone oxidoreductase subunit n | DUE52_15185 | Not Available | Negative | 3732733 - 3734241 | 54261.4 |
| hypothetical protein | DUE52_15190 | Not Available | Positive | 3734386 - 3735036 | 24309.0 |
| terc family protein | DUE52_15195 | Not Available | Negative | 3735131 - 3735946 | 29632.1 |
| capsular biosynthesis protein | DUE52_15200 | Not Available | Positive | 3736846 - 3739182 | 86951.6 |
| n-acetyl sugar amidotransferase | DUE52_15205 | Not Available | Positive | 3739244 - 3740515 | 49500.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
